I had a similar situation with a PAN correction request.
The important thing is to distinguish application status from simply checking whether an existing PAN is active.
The Income Tax e-Filing portal has a Verify PAN service, but that is mainly for checking PAN details such as the name and date of birth and whether the PAN is active. It isn't the same as tracking a pending PAN application.
For my application, I used the acknowledgement number provided when I submitted the request.
If you applied for an Instant e-PAN through Aadhaar, that's a different process. The Income Tax Department provides a separate "Check Status / Download e-PAN" option where you enter your Aadhaar number and authenticate with an OTP.
So I'd first identify which type of PAN application you submitted before trying to track it.
If your application was submitted through Protean, you can track it using the 15-digit acknowledgement number from your acknowledgement receipt.
Protean's current PAN FAQ says the application status can be checked through its Status Track facility after three days of the application, using the unique 15-digit acknowledgement number. It also lists IVR and WhatsApp as alternative status-checking options.
I would first try the online tracker rather than submitting another application.
In my case, the status didn't change immediately after submission. I just kept the acknowledgement receipt and checked again after a few days.
Also make sure you're entering the acknowledgement number exactly as shown on the receipt. A single missing digit can obviously cause problems.
If your application was submitted through a different PAN service provider, check that provider's tracking system instead.
I had the same confusion when I applied. I was initially checking the Income Tax e-Filing portal because I thought that would show the application status automatically.
What worked for me was going back to the application receipt and identifying the application service/provider. I then used the relevant official tracking facility.
Also, don't confuse PAN verification with PAN application tracking. PAN verification is generally about checking an already issued PAN, while application tracking is about following an application that is still being processed.
If the status says the application is under process, I'd wait unless the system specifically asks for additional information or documents.
If there is an unusually long delay, check the latest instructions from the relevant official source. Procedures can change, and processing can vary between individual applications.
I used UTIITSL for my application, so I didn't use the Protean tracking page. I used the tracking option associated with UTIITSL and entered the application details from my receipt.
The terminology can definitely be confusing because people often use “PAN status” to mean several different things.
There is the status of the PAN application, the actual PAN allotment/generation, and then the delivery of a physical PAN card if one was requested.
In my case, I first saw that the application was being processed. Once the PAN was allotted, the situation was different from simply waiting for the physical card.
I'd recommend keeping the acknowledgment receipt until everything is completed. It contains useful reference information if you need to check the application again.
If your application is only a few days old, I wouldn't submit another application just because the status hasn't changed yet. I'd continue checking the official tracking facility using the details from your original application.
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I wouldn't worry just because the status hasn't changed after a few days.
Keep the acknowledgement receipt because the number on it is what you'll normally need for tracking a Protean PAN application. The official Protean information specifically states that a unique 15-digit acknowledgement number is issued and can be used to track the application.
If the online status remains unchanged for an unusually long period, you can also contact the PAN service provider rather than submitting another application.
One thing I learned the hard way: don't apply for another PAN just because the first application appears delayed. PAN is a unique identifier, and having multiple PANs can create a separate problem.
If you're waiting for a correction or reprint, the tracking process can also depend on which provider handled the request.